STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1277PFAM: protein of unknown function DUF951; KEGG: bha:BH4052 hypothetical protein. (70 aa)    
Predicted Functional Partners:
Tter_1278
PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_2643 major facilitator superfamily (MFS) transporter.
       0.773
Tter_0911
PFAM: protein of unknown function DUF448; KEGG: bcy:Bcer98_2467 hypothetical protein.
  
     0.691
Tter_1639
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bha:BH2516 fibronectin/fibrinogen-binding protein.
  
     0.629
Tter_1850
TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; KEGG: aba:Acid345_3198 translation-associated GTPase.
  
  
 0.559
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
 
     0.529
Tter_1276
PFAM: GCN5-related N-acetyltransferase; KEGG: glo:Glov_2306 ribosomal-protein-alanine acetyltransferase.
       0.512
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
  
     0.492
Tter_0682
PFAM: protein of unknown function DUF970; KEGG: bha:BH0043 hypothetical protein.
 
     0.453
Tter_0044
TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A0291 ribosomal-protein-alanine acetyltransferase.
  
     0.449
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
     0.426
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.