STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1291PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0001624 putative sugar ABC transporter, substrate-binding protein. (470 aa)    
Predicted Functional Partners:
Tter_1290
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_1219 binding-protein-dependent transport systems inner membrane component.
 
   0.870
Tter_1289
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL1659 putative transmembrane component of ABC transporter.
 
   0.855
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
  
   0.642
Tter_0427
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3413 putative sugar transporter sugar binding protein.
  
     0.626
Tter_2025
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU28750 sugar-binding protein.
  
     0.577
Tter_1287
Hypothetical protein.
       0.511
Tter_1288
Sarcosine oxidase; PFAM: FAD dependent oxidoreductase; KEGG: sus:Acid_5898 N-methyltryptophan oxidase.
       0.511
Tter_1292
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: slo:Shew_2209 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
       0.506
Tter_1095
PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter.
  
     0.504
Tter_2504
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.472
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.