STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1298PFAM: beta-lactamase; KEGG: bcr:BCAH187_A2346 hypothetical protein. (566 aa)    
Predicted Functional Partners:
Tter_0602
Beta-lactamase; KEGG: sus:Acid_4466 beta-lactamase.
   
 0.838
Tter_0248
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: aba:Acid345_2116 peptidase S9, prolyl oligopeptidase.
 
     0.782
Tter_1297
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ses:SARI_01289 hypothetical protein.
       0.732
Tter_1214
PFAM: Amidohydrolase 3; KEGG: ilo:IL1207 metal-dependent amidohydrolase with the TIM-barrel fold.
 
     0.681
Tter_1299
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: xac:XAC0672 hypothetical protein.
 
     0.626
Tter_1709
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; WD40 domain protein beta Propeller; BAAT/Acyl-CoA thioester hydrolase; KEGG: oan:Oant_3086 peptidase S9 prolyl oligopeptidase active site domain protein.
 
     0.578
Tter_0353
Asparaginase; PFAM: peptidase T2 asparaginase 2; KEGG: spe:Spro_2851 asparaginase.
  
   
 0.533
Tter_0464
KEGG: sse:Ssed_0948 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
  
     0.502
Tter_1300
PFAM: UbiA prenyltransferase; KEGG: dol:Dole_2097 UbiA prenyltransferase.
  
    0.502
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.