STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1324PFAM: FAD dependent oxidoreductase; KEGG: bcy:Bcer98_1848 FAD dependent oxidoreductase. (375 aa)    
Predicted Functional Partners:
Tter_0256
PFAM: aminotransferase class I and II; KEGG: mgm:Mmc1_0698 L-aspartate aminotransferase.
 
  
 0.925
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: EMB2196/HISN6A/HPA1 (EMBRYO DEFECTIVE 2196); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.904
Tter_0772
PFAM: aminotransferase class I and II; KEGG: HIS5; histidinol phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase.
   
 
 0.904
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
 
 
 0.790
Tter_1323
Hypothetical protein.
       0.773
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
  
  
 0.529
Tter_2438
Transcriptional activator, TenA family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
 
  
 0.511
Tter_1322
PFAM: aldo/keto reductase; KEGG: sus:Acid_5876 aldo/keto reductase.
       0.499
Tter_1321
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: mpo:Mpop_1230 NAD-dependent epimerase/dehydratase.
       0.473
Tter_1313
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; thiamineS protein; KEGG: sus:Acid_0755 UBA/ThiF-type NAD/FAD binding protein.
  
  
 0.472
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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