STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1414PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: aeh:Mlg_0602 peptidase S16, lon domain- containing protein. (213 aa)    
Predicted Functional Partners:
Tter_1313
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; thiamineS protein; KEGG: sus:Acid_0755 UBA/ThiF-type NAD/FAD binding protein.
   
 0.684
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.606
Tter_1415
PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: molybdenum hydroxylase accessory protein, YgfJ family; K07141.
       0.538
Tter_1416
PFAM: NUDIX hydrolase; KEGG: hch:HCH_10012 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
       0.538
Tter_1417
KEGG: ppd:Ppro_1552 molybdopterin binding domain- containing protein.
       0.538
lon-3
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
   
 0.442
Tter_0696
PFAM: SMC domain protein; KEGG: sun:SUN_0726 DNA double-strand break repair protein.
    
 0.427
Tter_1874
PFAM: SMC domain protein; KEGG: SMC domain protein.
    
 0.427
Tter_0697
PFAM: metallophosphoesterase; KEGG: pca:Pcar_1060 DNA repair exonuclease.
    
 0.410
Tter_1873
PFAM: metallophosphoesterase; KEGG: gsu:GSU1724 nuclease SbcCD, D subunit, putative.
    
 0.410
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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