STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1460KEGG: bcy:Bcer98_1709 hypothetical protein. (173 aa)    
Predicted Functional Partners:
Tter_2566
PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bcu:BCAH820_0189 hypothetical protein.
  
     0.582
Tter_2557
PFAM: DoxX family protein; TQO small subunit DoxD; KEGG: bcu:BCAH820_0189 hypothetical protein.
  
     0.562
Tter_1461
PFAM: glycosyl transferase family 2; KEGG: bat:BAS3232 glycosyl transferase, group 2 family protein.
       0.556
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.