Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Tter_1464PFAM: protein of unknown function DUF6 transmembrane; KEGG: sfu:Sfum_2001 protein of unknown function DUF6, transmembrane. (310 aa)    
Predicted Functional Partners:
Tter_1465
PFAM: Polyprenyl synthetase; KEGG: GGPS; geranylgeranyl diphosphate synthase; K00795 geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
   
   0.665
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
  
    0.656
Tter_1468
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: amc:MADE_03118 FOG: TPR repeat 2396 protein.
       0.592
Tter_1467
Hypothetical protein.
       0.583
Tter_1469
Hypothetical protein.
       0.583
Tter_1463
PFAM: Circadian clock protein KaiC central region; KEGG: nis:NIS_1761 ATPase.
       0.544
Tter_1691
PFAM: protein of unknown function DUF554; KEGG: sfu:Sfum_1389 protein of unknown function DUF554.
  
     0.523
Tter_1462
KEGG: nis:NIS_1760 hypothetical protein.
       0.495
Tter_1470
KEGG: rce:RC1_2168 hypothetical protein.
       0.459
Tter_0024
PFAM: protein of unknown function DUF6 transmembrane; KEGG: dal:Dalk_1254 protein of unknown function DUF6 transmembrane.
  
     0.428
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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