STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1474PFAM: oxidoreductase domain protein; aldo/keto reductase; Semialdehyde dehydrogenase NAD - binding; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mlr6441 oxidoreductase. (667 aa)    
Predicted Functional Partners:
Tter_2744
KEGG: hypothetical protein.
  
     0.730
Tter_1475
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mes:Meso_3687 alpha amylase, catalytic region.
  
  
 0.729
Tter_1476
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: esa:ESA_03378 nucleotidase.
  
    0.710
Tter_1946
PFAM: Phytanoyl-CoA dioxygenase; KEGG: similar to phytanoyl-CoA hydroxylase (Refsum disease).
 
    0.695
Tter_2355
PFAM: Phytanoyl-CoA dioxygenase; KEGG: bce:BC5091 SnoK-like protein.
 
    0.627
Tter_1160
KEGG: rle:RL3145 putative dehydrogenases.
 
    0.599
Tter_1236
PFAM: protein of unknown function DUF1037; KEGG: lch:Lcho_3205 hypothetical protein.
 
    0.587
Tter_2042
PFAM: extracellular solute-binding protein family 1; KEGG: sit:TM1040_3216 extracellular solute-binding protein.
 
    0.585
Tter_0272
PFAM: aldo/keto reductase; KEGG: ret:RHE_CH00494 L-fucose dehydrogenase protein.
  
    0.571
Tter_1972
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3218 aldo/keto reductase.
  
 
 0.542
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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