STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1486PFAM: amidohydrolase; KEGG: nmu:Nmul_A2187 N-ethylammeline chlorohydrolase. (435 aa)    
Predicted Functional Partners:
Tter_0266
PFAM: Spermine synthase; KEGG: ade:Adeh_3062 spermine synthase.
   
  0.910
Tter_1485
KEGG: sfu:Sfum_0366 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD- binding; S-adenosyl-L-homocysteine hydrolase.
 
    0.842
Tter_1484
Adenosylhomocysteinase; KEGG: aba:Acid345_3662 S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD- binding; S-adenosyl-L-homocysteine hydrolase.
 
    0.839
Tter_1279
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sat:SYN_02180 membrane protease subunit, stomatin/prohibitin -like protein.
      0.762
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.657
Tter_2286
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: pfo:Pfl01_4136 permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
  
 0.557
Tter_1487
PFAM: protein of unknown function DUF505; KEGG: nis:NIS_0015 hypothetical protein.
       0.496
Tter_1855
PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mes:Meso_1800 peptidase M23B.
  
    0.448
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.408
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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