STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1500KEGG: mxa:MXAN_0347 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein. (590 aa)    
Predicted Functional Partners:
Tter_0789
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pin:Ping_0978 response regulator receiver modulated diguanylate cyclase.
 
 0.972
Tter_2088
PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mca:MCA2214 sensor histidine kinase KdpD.
 
      0.899
Tter_1098
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_0243 two component transcriptional regulator, winged helix family.
 
 0.867
Tter_1435
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2007 two component transcriptional regulator, winged helix family.
 
 0.824
Tter_2191
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: tgr:Tgr7_2472 response regulator receiver protein.
 
 0.823
Tter_2867
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bsu:BSU29110 two-component response regulator.
 
 0.821
Tter_1494
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_4320 two component transcriptional regulator.
 
 
 0.818
Tter_2709
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_5903 response regulator receiver protein.
 
 
 0.818
Tter_1071
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcr:BCAH187_A5650 DNA-binding response regulator YycF.
 
 0.815
Tter_1135
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH1580 two-component response regulator.
 
 
 0.812
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.