STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1501PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: alpha-mannosidase protein; K01191 alpha- mannosidase. (1076 aa)    
Predicted Functional Partners:
Tter_2525
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; KEGG: hypothetical protein; K01191 alpha- mannosidase.
  
  
 
0.929
Tter_1503
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; glycosyl hydrolase 38 domain protein; KEGG: hypothetical protein; K01191 alpha- mannosidase.
  
  
 
0.923
Tter_2436
PFAM: glycoside hydrolase family 38; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like.
  
  
  0.920
Tter_1502
PFAM: protein of unknown function DUF624; KEGG: bsu:BSU30090 hypothetical protein.
 
     0.646
Tter_2063
PFAM: ADP-ribosylation/Crystallin J1; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1.
  
     0.517
Tter_1987
PFAM: ADP-ribosylation/Crystallin J1; KEGG: hypothetical protein.
  
     0.459
Tter_0622
KEGG: smd:Smed_2312 hypothetical protein.
 
     0.404
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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