STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1510KEGG: aba:Acid345_3204 hypothetical protein. (396 aa)    
Predicted Functional Partners:
Tter_1588
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.996
Tter_1595
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 
 0.994
Tter_2537
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain- containing protein.
  
 
 0.920
Tter_1586
PFAM: cytochrome c oxidase subunit III; KEGG: scl:sce7594 putative cytochrome-c oxidase.
  
 
 0.888
Tter_2153
KEGG: smd:Smed_6282 hypothetical protein.
  
 
 0.853
Tter_1507
PFAM: cytochrome c assembly protein; KEGG: sus:Acid_4232 cytochrome c assembly protein.
     
 0.815
Tter_1508
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
     
 0.809
Tter_1587
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 
 0.797
Tter_1506
PFAM: CcmE/CycJ protein; KEGG: dds:Ddes_2369 cytochrome c-type biogenesis protein CcmE.
     
 0.794
Tter_1509
KEGG: hypothetical protein.
       0.773
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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