STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1513PFAM: conserved hypothetical protein; KEGG: bha:BH0674 hypothetical protein. (388 aa)    
Predicted Functional Partners:
Tter_2604
PFAM: beta-lactamase; KEGG: aba:Acid345_2615 uncharacterised conserved protein UCP016719.
  
 0.980
Tter_1713
PFAM: beta-lactamase; KEGG: gsu:GSU2047 hypothetical protein.
  
 0.964
Tter_2605
PFAM: glycoside hydrolase family 3 domain protein; KEGG: hypothetical protein; K01207 beta-N- acetylhexosaminidase.
  
 0.928
Tter_1511
PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: Os09g0133700; hypothetical protein.
 
    0.903
Tter_0445
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bsu:BSU01660 hypothetical protein.
  
 0.876
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.849
Tter_2130
PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: sus:Acid_3789 ATPase, BadF/BadG/BcrA/BcrD type.
 
    0.681
Tter_2571
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
 
     0.613
Tter_1514
KEGG: sun:SUN_2245 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3.
       0.576
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.