STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
crcBCrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (123 aa)    
Predicted Functional Partners:
Tter_1554
PFAM: major facilitator superfamily MFS_1; KEGG: mno:Mnod_3105 major facilitator superfamily MFS_1.
     
 0.731
Tter_2283
PFAM: protein of unknown function DUF190; KEGG: rpe:RPE_2850 protein of unknown function DUF190.
 
     0.727
Tter_0615
PFAM: protein of unknown function DUF190; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: acp:A2cp1_3392 protein of unknown function DUF190.
 
     0.596
Tter_1555
PFAM: conserved hypothetical protein; KEGG: hypothetical protein; Belongs to the LOG family.
       0.506
Tter_1556
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bav:BAV2538 MarR-family transcriptional regulator.
       0.468
Tter_1552
PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_2098 luciferase family protein.
       0.449
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.