STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1571PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: atc:AGR_L_2949 hypothetical protein. (377 aa)    
Predicted Functional Partners:
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
    0.795
Tter_1905
PFAM: oxidoreductase domain protein; KEGG: oan:Oant_3060 oxidoreductase domain protein.
  
     0.772
Tter_0541
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1.
  
     0.768
Tter_1808
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:RL4246 GFO/IDH/MocA family oxidoreductase.
  
     0.768
Tter_2602
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bid:Bind_0626 oxidoreductase domain- containing protein.
  
     0.763
Tter_1882
PFAM: oxidoreductase domain protein; KEGG: sus:Acid_2175 oxidoreductase domain- containing protein.
  
     0.751
Tter_2606
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mll1511 hypothetical protein.
  
     0.746
Tter_1572
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bha:BH0708 hypothetical protein.
 
    
0.673
Tter_1570
PFAM: NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_7076 NAD-dependent epimerase/dehydratase.
  
    0.653
Tter_2532
PFAM: oxidoreductase domain protein; KEGG: thuBf; myo-inositol 2-dehydrogenase protein.
  
     0.652
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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