Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_1576PFAM: Abortive infection protein; KEGG: bcy:Bcer98_0164 abortive infection protein. (241 aa)    
Predicted Functional Partners:
Tter_1577
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bba:Bd2444 ferric uptake regulation protein; Belongs to the Fur family.
       0.532
Tter_1578
PFAM: periplasmic solute binding protein; KEGG: bsu:BSU02850 hypothetical protein; Belongs to the bacterial solute-binding protein 9 family.
       0.532
Tter_1579
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_1834 ABC transporter related.
       0.532
Tter_1580
PFAM: ABC-3 protein; KEGG: bcb:BCB4264_A4398 putative cation ABC transporter, permease protein.
       0.525
Tter_1856
PFAM: nitroreductase; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gsu:GSU2525 nitroreductase family protein.
  
  
 0.452
Tter_0218
PFAM: nitroreductase; KEGG: gsu:GSU2525 nitroreductase family protein.
  
  
 0.445
Tter_2170
PFAM: nitroreductase; KEGG: pen:PSEEN3911 nitroreductase.
  
  
 0.445
Tter_1575
Hypothetical protein.
       0.431
Tter_1062
KEGG: ccv:CCV52592_0502 cytoplasmic membrane protein.
  
     0.419
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
   
  
 0.417
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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