STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1594PFAM: Polysulphide reductase NrfD; KEGG: aba:Acid345_3002 polysulphide reductase, NrfD. (463 aa)    
Predicted Functional Partners:
Tter_1595
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
 
 0.999
Tter_1593
KEGG: sus:Acid_0492 transmembrane prediction.
 
 
 0.998
Tter_1592
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit; KEGG: sus:Acid_0493 hypothetical protein.
 
 
 
 0.989
Tter_1596
KEGG: sus:Acid_0489 chaperone protein HtpG.
 
 
 
 0.983
Tter_1588
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 
 0.982
Tter_1591
KEGG: noc:Noc_1242 hypothetical protein.
 
 
 0.982
Tter_1589
PFAM: electron transport protein SCO1/SenC; KEGG: sus:Acid_0496 electron transport protein SCO1/SenC.
 
   
 0.942
Tter_0515
PFAM: cytochrome c class I; KEGG: gur:Gura_0414 cytochrome c oxidase subunit II, transmembrane region.
 
 
 
 0.932
Tter_1585
TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: sus:Acid_0500 caa(3)-type oxidase, subunit IV.
 
     0.897
Tter_0612
KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; Contains selenocysteine; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide- binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.882
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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