STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1595KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit. (984 aa)    
Predicted Functional Partners:
Tter_1588
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.999
Tter_1591
KEGG: noc:Noc_1242 hypothetical protein.
 
 
 0.999
Tter_1592
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit; KEGG: sus:Acid_0493 hypothetical protein.
 
 
 0.999
Tter_1593
KEGG: sus:Acid_0492 transmembrane prediction.
 
 
 0.999
Tter_1594
PFAM: Polysulphide reductase NrfD; KEGG: aba:Acid345_3002 polysulphide reductase, NrfD.
 
 
 0.999
Tter_1596
KEGG: sus:Acid_0489 chaperone protein HtpG.
 
 
 0.999
Tter_0515
PFAM: cytochrome c class I; KEGG: gur:Gura_0414 cytochrome c oxidase subunit II, transmembrane region.
 
 
 0.998
Tter_1510
KEGG: aba:Acid345_3204 hypothetical protein.
  
 
 0.994
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.993
Tter_1478
KEGG: bpl:BURPS1106A_A0997 hypothetical protein.
  
 
 0.993
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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