STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1670Hypothetical protein; KEGG: maq:Maqu_3075 nitrous-oxide reductase, NosY component. (277 aa)    
Predicted Functional Partners:
Tter_1669
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0445 ABC transporter ATP-binding protein.
  
 
 0.855
Tter_1671
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bcy:Bcer98_3864 3-hydroxybutyryl-CoA dehydrogenase.
  
    0.710
Tter_1672
methylmalonyl-CoA mutase, large subunit; KEGG: sus:Acid_6472 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
       0.483
Tter_0236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4236 heme exporter protein CcmA.
  
 
 0.453
Tter_0461
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_0670 ABC transporter related.
  
 
 0.453
Tter_0475
PFAM: ABC-2 type transporter; KEGG: tcx:Tcr_0985 hypothetical protein.
  
 
 0.453
Tter_0476
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4381 ABC transporter related.
  
 
 0.453
Tter_0482
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2797 ABC transporter, ATPase subunit.
  
 
 0.453
Tter_0695
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0658 ABC transporter-related protein.
  
 
 0.453
Tter_1122
KEGG: ank:AnaeK_4022 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.453
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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