STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1679KEGG: met:M446_4899 hypothetical protein. (517 aa)    
Predicted Functional Partners:
Tter_1676
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mxa:MXAN_6624 AhpC/TSA family protein.
       0.523
Tter_1677
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: sat:SYN_00474 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit.
       0.523
Tter_1678
KEGG: mxa:MXAN_0451 PAP2 family protein.
       0.523
Tter_0754
Hypothetical protein.
  
     0.496
Tter_1450
Hypothetical protein.
  
     0.463
Tter_0637
PFAM: sodium/calcium exchanger membrane region; KEGG: dvm:DvMF_1109 sodium/calcium exchanger membrane region.
  
     0.429
Tter_2861
PFAM: bifunctional deaminase-reductase domain protein; KEGG: smd:Smed_5058 bifunctional deaminase- reductase domain protein.
  
     0.410
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.