STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1680PFAM: protein of unknown function DUF255; KEGG: dal:Dalk_2829 protein of unknown function DUF255. (686 aa)    
Predicted Functional Partners:
Tter_2195
PFAM: glycoside hydrolase family 5; KEGG: aba:Acid345_1689 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.798
Tter_1907
KEGG: hypothetical protein.
   
 
 0.583
Tter_1998
KEGG: hypothetical protein.
   
 
 0.583
Tter_2666
KEGG: atc:AGR_L_146 hypothetical protein.
   
 
 0.583
Tter_0425
PFAM: putative esterase; KEGG: mxa:MXAN_4392 putative esterase.
    
   0.536
Tter_1479
Endo-1,4-beta-xylanase; KEGG: hypothetical protein; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
    
   0.483
Tter_0130
KEGG: bsu:BSU06570 hypothetical protein.
    
   0.435
Tter_0358
KEGG: similar to hedgehog protein.
    
   0.435
Tter_0360
KEGG: mca:MCA0997 hypothetical protein.
    
   0.435
Tter_1237
PFAM: PEGA domain protein; KEGG: bsu:BSU06570 hypothetical protein.
    
   0.435
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.