STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1692PFAM: Translin; KEGG: translin family protein. (216 aa)    
Predicted Functional Partners:
Tter_1036
Membrane-bound mannosyltransferase-like protein; KEGG: bba:Bd1123 putative membrane-bound mannosyltransferase.
  
     0.752
Tter_1693
Hypothetical protein.
       0.701
Tter_0944
PFAM: glycosyl transferase family 39; KEGG: xop:PXO_04470 dolichyl-phosphate-mannose- protein mannosyltransferase.
  
     0.689
Tter_0803
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bha:BH0078 stage II sporulation protein E.
  
     0.600
Tter_0684
PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; single-stranded nucleic acid binding R3H domain protein; KEGG: sfu:Sfum_0872 single-stranded nucleic acid binding R3H domain protein.
 
     0.598
Tter_1691
PFAM: protein of unknown function DUF554; KEGG: sfu:Sfum_1389 protein of unknown function DUF554.
       0.590
Tter_0945
Uncharacterized membrane protein-like protein.
  
     0.564
Tter_1465
PFAM: Polyprenyl synthetase; KEGG: GGPS; geranylgeranyl diphosphate synthase; K00795 geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
    0.564
Tter_0916
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.536
Tter_1816
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bar:GBAA0439 hypothetical protein.
  
     0.522
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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