STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1764KEGG: noc:Noc_1089 hypothetical protein. (197 aa)    
Predicted Functional Partners:
Tter_1762
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: oca:OCAR_6548 transcriptional regulator, MarR family.
 
     0.908
Tter_1763
PFAM: glutamine amidotransferase class-I; KEGG: azo:azo2531 glutamine amidotransferase.
       0.746
Tter_2715
KEGG: sus:Acid_0589 hypothetical protein.
  
     0.514
Tter_1761
Hypothetical protein.
       0.466
Tter_0944
PFAM: glycosyl transferase family 39; KEGG: xop:PXO_04470 dolichyl-phosphate-mannose- protein mannosyltransferase.
  
     0.450
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.