STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1816PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bar:GBAA0439 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Tter_1815
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.953
Tter_1028
PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: tcx:Tcr_1360 replicative DNA helicase.
  
 
 0.837
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
     
 0.772
Tter_1036
Membrane-bound mannosyltransferase-like protein; KEGG: bba:Bd1123 putative membrane-bound mannosyltransferase.
  
     0.715
dacA
Protein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
 
   
 0.659
Tter_0944
PFAM: glycosyl transferase family 39; KEGG: xop:PXO_04470 dolichyl-phosphate-mannose- protein mannosyltransferase.
  
     0.653
Tter_1819
PFAM: YbbR family protein; KEGG: sus:Acid_1910 YbbR family protein.
 
     0.641
Tter_0945
Uncharacterized membrane protein-like protein.
  
     0.617
dinG
DNA polymerase III, epsilon subunit; 3'-5' exonuclease.
  
  
 0.574
Tter_1818
KEGG: sfu:Sfum_1584 hypothetical protein.
       0.556
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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