STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1846PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: ppr:PBPRA2684 hypothetical protein. (433 aa)    
Predicted Functional Partners:
Tter_1842
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase.
 
  
 0.910
Tter_1847
PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_3084 glycosyl transferase group 1.
  
  
 0.840
Tter_1848
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pap:PSPA7_1033 putative epimerase.
  
  
 0.783
Tter_1304
PFAM: Nucleotidyl transferase; KEGG: pca:Pcar_0276 glucose-1-phosphate thymidylyltransferase.
 
  
 0.760
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.746
Tter_1843
PFAM: glycosyl transferase group 1; KEGG: mex:Mext_3565 glycosyl transferase group 1.
  
  
 0.655
Tter_0698
Nucleotide sugar dehydrogenase; KEGG: sfu:Sfum_3370 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol- 3-phosphate dehydrogenase domain protein.
  
  
 0.591
Tter_1130
Nucleotide sugar dehydrogenase; KEGG: bsu:BSU35580 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol- 3-phosphate dehydrogenase domain protein.
  
  
 0.591
Tter_1844
PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2008 glycosyl transferase family protein.
  
  
 0.560
Tter_1845
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: mag:amb0056 nucleoside-diphosphate-sugar epimerase.
  
  
 0.533
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.