STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1853PFAM: ABC-2 type transporter; KEGG: pmr:PMI0616 ABC transporter, permease protein. (386 aa)    
Predicted Functional Partners:
Tter_0695
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0658 ABC transporter-related protein.
    0.825
Tter_2578
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmr:Mmar10_0505 ABC transporter related.
    0.818
Tter_2250
PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein.
  
  
  0.730
Tter_2251
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: har:HEAR2358 ABC-type drug export system, ATP- binding protein.
    0.703
Tter_0476
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4381 ABC transporter related.
    0.653
Tter_2672
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_3803 ABC transporter-related protein.
    0.577
Tter_1774
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC3591 ABC transporter ATP-binding protein.
    0.572
Tter_1439
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU0011 ABC transporter, ATP-binding protein.
    0.571
Tter_1438
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
  
  
  0.554
Tter_2579
PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A2507 putative ABC transporter, permease protein.
  
  
 
0.538
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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