STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1882PFAM: oxidoreductase domain protein; KEGG: sus:Acid_2175 oxidoreductase domain- containing protein. (348 aa)    
Predicted Functional Partners:
Tter_1881
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: hypothetical protein.
 
    
0.753
Tter_1571
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: atc:AGR_L_2949 hypothetical protein.
  
     0.751
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
    0.710
Tter_2532
PFAM: oxidoreductase domain protein; KEGG: thuBf; myo-inositol 2-dehydrogenase protein.
  
     0.601
Tter_1930
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oxidoreductase protein.
  
     0.580
Tter_0621
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sfu:Sfum_1980 xylose isomerase domain protein TIM barrel.
  
    0.548
Tter_1883
PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: afw:Anae109_1606 FAD linked oxidase domain- containing protein.
  
    0.526
Tter_2265
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0002098 putative dehydrogenase protein.
  
     0.526
Tter_0895
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_1577 xylose isomerase domain- containing protein.
  
    0.474
Tter_1807
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rec:RHECIAT_PC0000985 putative xylose isomerase domain protein.
  
    0.459
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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