STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1916PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH1248 NADH-dependent dyhydrogenase. (335 aa)    
Predicted Functional Partners:
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
    0.793
Tter_0541
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1.
  
     0.774
Tter_1905
PFAM: oxidoreductase domain protein; KEGG: oan:Oant_3060 oxidoreductase domain protein.
  
     0.773
Tter_0322
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: jan:Jann_1468 oxidoreductase-like.
  
     0.769
Tter_2138
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbt:BBta_3988 putative dehydrogenase/oxidoreductase.
  
     0.765
Tter_2700
PFAM: oxidoreductase domain protein; KEGG: hypothetical protein.
  
     0.753
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
  
     0.723
Tter_2606
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mll1511 hypothetical protein.
  
     0.716
Tter_1915
KEGG: predicted protein.
       0.538
Tter_1524
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sus:Acid_1483 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
  
 0.423
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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