Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_1925PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mes:Meso_4484 oxidoreductase-like. (351 aa)    
Predicted Functional Partners:
Tter_0274
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: probable dehydrogenase.
  
     0.774
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
  
     0.758
Tter_2532
PFAM: oxidoreductase domain protein; KEGG: thuBf; myo-inositol 2-dehydrogenase protein.
  
     0.674
Tter_2814
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mag:amb0126 dehydrogenase and related protein.
  
     0.569
Tter_1924
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mno:Mnod_3088 hydroxypyruvate isomerase; Belongs to the hyi family.
  
    0.546
Tter_1923
TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: cti:RALTA_B0765 2-hydroxy-3-oxopropionate reductase (tartronate semialdehyde reductase) (TSAR).
       0.532
Tter_1926
PFAM: aminoglycoside phosphotransferase; KEGG: mpo:Mpop_1539 aminoglycoside phosphotransferase.
       0.526
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: bsu:BSU00820 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.414
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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