STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1926PFAM: aminoglycoside phosphotransferase; KEGG: mpo:Mpop_1539 aminoglycoside phosphotransferase. (284 aa)    
Predicted Functional Partners:
Tter_2042
PFAM: extracellular solute-binding protein family 1; KEGG: sit:TM1040_3216 extracellular solute-binding protein.
  
     0.711
Tter_2744
KEGG: hypothetical protein.
  
     0.701
Tter_2749
PFAM: extracellular solute-binding protein family 5; KEGG: dsh:Dshi_3011 extracellular solute-binding protein.
  
     0.679
Tter_1946
PFAM: Phytanoyl-CoA dioxygenase; KEGG: similar to phytanoyl-CoA hydroxylase (Refsum disease).
 
    0.611
Tter_2025
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU28750 sugar-binding protein.
  
     0.573
Tter_1927
PFAM: extracellular solute-binding protein family 5; KEGG: rec:RHECIAT_PC0000423 probable oligopeptide ABC transporter, substrate-binding protein.
 
     0.561
Tter_1925
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mes:Meso_4484 oxidoreductase-like.
       0.526
Tter_0433
PFAM: aminoglycoside phosphotransferase; KEGG: bcb:BCB4264_A2807 hypothetical protein.
 
     0.483
Tter_2355
PFAM: Phytanoyl-CoA dioxygenase; KEGG: bce:BC5091 SnoK-like protein.
 
    0.459
Tter_2644
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1924 sugar transport system (sugar- binding protein).
  
     0.452
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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