STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1931Hypothetical protein. (177 aa)    
Predicted Functional Partners:
Tter_1932
TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pst:PSPTO_1597 ribonuclease BN, putative.
       0.509
Tter_1928
Hypothetical protein; KEGG: sus:Acid_2874 transmembrane prediction.
       0.427
Tter_1929
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: kpe:KPK_2481 muconate cycloisomerase.
       0.427
Tter_1930
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oxidoreductase protein.
       0.427
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.