STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1955PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mes:Meso_0996 glycerophosphoryl diester phosphodiesterase. (265 aa)    
Predicted Functional Partners:
Tter_2729
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bha:BH3700 glycerophosphoryl diester phosphodiesterase.
  
  
  0.943
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.557
Tter_2778
PFAM: PA14 domain protein; metallophosphoesterase; SMART: PA14 domain protein; KEGG: sde:Sde_1146 hypothetical protein.
  
  
 0.521
Tter_1954
TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; KEGG: sfu:Sfum_1352 CRISPR-associated protein, TM1812 family.
       0.503
Tter_1956
PFAM: protein of unknown function DUF187; KEGG: bpl:BURPS1106A_1973 putative lipoprotein.
       0.501
Tter_1953
TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; KEGG: sfu:Sfum_1352 CRISPR-associated protein, TM1812 family.
       0.481
Tter_1947
TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324; KEGG: tgr:Tgr7_1795 CRISPR-associated RAMP protein, Cmr6 family.
       0.475
Tter_1948
TIGRFAM: CRISPR-associated protein, Cmr5 family; KEGG: sat:SYN_02248 putative cytoplasmic protein.
       0.475
Tter_1949
TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: tgr:Tgr7_1793 CRISPR-associated RAMP protein, Cmr4 family.
       0.475
Tter_1950
TIGRFAM: CRISPR-associated protein, Cmr3 family; KEGG: tgr:Tgr7_1792 hypothetical protein.
       0.475
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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