STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1985PFAM: protein of unknown function DUF1326; KEGG: bmu:Bmul_4169 hypothetical protein. (207 aa)    
Predicted Functional Partners:
Tter_1983
KEGG: mlo:mll6464 hypothetical protein.
     0.962
Tter_1984
Hypothetical protein.
       0.693
Tter_1982
PFAM: protein of unknown function DUF1326; KEGG: mlo:mll6465 hypothetical protein.
 
    
0.661
Tter_1981
PFAM: protein of unknown function DUF1326; KEGG: bmn:BMA10247_0511 hypothetical protein.
 
    
0.549
Tter_1311
PFAM: selenium-binding protein; KEGG: rde:RD1_2378 selenium binding protein.
  
     0.484
Tter_0892
Hypothetical protein; KEGG: mmr:Mmar10_1905 putative outer membrane adhesin like proteiin.
  
     0.413
Tter_1995
PFAM: Hemolysin-type calcium-binding region; KEGG: pde:Pden_2124 hemolysin-type calcium-binding region.
  
     0.406
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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