STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1991PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein. (286 aa)    
Predicted Functional Partners:
Tter_1990
PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein.
 
  0.988
Tter_1103
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1065 hypothetical protein.
 
  0.963
Tter_1101
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU30160 hypothetical protein.
  
  0.961
Tter_1992
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1065 hypothetical protein.
 
   0.947
Tter_2001
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4664 binding-protein-dependent transport systems inner membrane component.
 
  
 
0.936
Tter_1102
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein.
  
  
 
0.912
Tter_2000
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02025 multiple sugar transport system permease protein.
   0.793
Tter_1962
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1635 sugar ABC transporter, permease.
  
   0.753
Tter_1094
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
   0.733
Tter_2527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3689 sugar transport system (permease).
  
   0.728
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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