STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_1995PFAM: Hemolysin-type calcium-binding region; KEGG: pde:Pden_2124 hemolysin-type calcium-binding region. (257 aa)    
Predicted Functional Partners:
Tter_2029
PFAM: Hemolysin-type calcium-binding region; KEGG: gur:Gura_2550 putative outer membrane adhesin like protein.
 
 
 0.823
Tter_1993
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bra:BRADO4410 putative regulator (HTH, AraC- type).
 
     0.539
Tter_1994
PFAM: GCN5-related N-acetyltransferase; KEGG: pla:Plav_1090 hypothetical protein.
  
    0.532
Tter_1998
KEGG: hypothetical protein.
     
 0.504
Tter_1996
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mlo:mll6911 transcriptional regulator.
       0.489
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
       0.489
Tter_1982
PFAM: protein of unknown function DUF1326; KEGG: mlo:mll6465 hypothetical protein.
  
     0.469
Tter_2109
PFAM: Carbohydrate-binding family 9; KEGG: bph:Bphy_6730 hypothetical protein.
  
 
 0.458
Tter_2262
Hypothetical protein; KEGG: dol:Dole_3117 WD40 domain-containing protein.
 
 0.444
Tter_1981
PFAM: protein of unknown function DUF1326; KEGG: bmn:BMA10247_0511 hypothetical protein.
  
     0.425
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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