STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2015PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU32940 hypothetical protein. (278 aa)    
Predicted Functional Partners:
Tter_2014
PFAM: transport system permease protein; KEGG: bha:BH3789 iron (III) dicitrate transport system (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.988
Tter_2013
PFAM: transport system permease protein; KEGG: bcr:BCAH187_A0744 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.985
Tter_2011
PFAM: periplasmic binding protein; KEGG: bcr:BCAH187_A0743 iron compound ABC transporter, iron compound-binding protein.
 
 
 0.980
Tter_1420
PFAM: transport system permease protein; KEGG: pde:Pden_4830 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.956
Tter_1802
KEGG: mes:Meso_4488 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.896
Tter_0898
KEGG: scl:sce4299 peptide ABC transporter, ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.857
Tter_1421
PFAM: periplasmic binding protein; KEGG: bsu:BSU33180 hypothetical protein.
 
 
 0.832
Tter_2012
PFAM: ferric iron reductase; KEGG: pmy:Pmen_2861 ferric iron reductase.
 
  
 0.825
Tter_1201
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_2371 ABC transporter, ATPase subunit.
 
 
  
0.791
Tter_2745
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: jan:Jann_2056 ABC transporter related; Belongs to the ABC transporter superfamily.
 
     
0.732
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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