Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tter_2017PFAM: iron permease FTR1; KEGG: mms:mma_1853 high affinity Fe2+/Pb2+ permease. (413 aa)    
Predicted Functional Partners:
Tter_2016
Hypothetical protein; KEGG: mfa:Mfla_1883 iron permease FTR1.
 
   
0.779
Tter_2018
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: smd:Smed_3269 hydantoinase/oxoprolinase.
 
     0.757
Tter_2019
Hypothetical protein.
       0.709
Tter_2020
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: msl:Msil_1523 transcriptional regulator, Crp/Fnr family.
       0.645
Tter_2330
KEGG: ilo:IL0111 high-affinity Fe2+/Pb2+ permease.
  
  
 
0.535
Tter_2011
PFAM: periplasmic binding protein; KEGG: bcr:BCAH187_A0743 iron compound ABC transporter, iron compound-binding protein.
  
  
 0.487
Tter_2155
KEGG: rpd:RPD_4272 copper resistance D.
  
     0.452
Tter_2013
PFAM: transport system permease protein; KEGG: bcr:BCAH187_A0744 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.451
Tter_2014
PFAM: transport system permease protein; KEGG: bha:BH3789 iron (III) dicitrate transport system (permease); Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.451
Tter_2015
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU32940 hypothetical protein.
  
  
 0.451
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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