STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2036PFAM: CsbD family protein; KEGG: hypothetical protein. (62 aa)    
Predicted Functional Partners:
Tter_0562
PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: esa:ESA_03540 hypothetical protein.
  
  
 0.980
Tter_2437
PFAM: CBS domain containing protein; transport- associated; transporter-associated region; SMART: CBS domain containing protein; KEGG: aeh:Mlg_0397 CBS domain-containing protein.
  
  
 0.690
Tter_1856
PFAM: nitroreductase; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: gsu:GSU2525 nitroreductase family protein.
  
    0.687
Tter_2165
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding.
  
    0.671
Tter_1005
PFAM: transport-associated; KEGG: rsh:Rsph17029_0778 transport-associated.
  
  
 0.570
Tter_0122
PFAM: OsmC family protein; KEGG: mes:Meso_3240 OsmC-like protein.
  
  
 0.546
Tter_1238
PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: sus:Acid_1436 tagatose-bisphosphate aldolase.
   
    0.522
Tter_2034
PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_2099 acetyltransferase.
  
    0.521
Tter_2035
PFAM: glycoside hydrolase 15-related; KEGG: noc:Noc_1617 glycoside hydrolase.
       0.520
Tter_2629
PFAM: Transglycosylase-associated protein; KEGG: kpe:KPK_2164 hypothetical protein.
 
  
 0.487
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.