STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2039PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase. (955 aa)    
Predicted Functional Partners:
Tter_2708
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein.
 
  
 
0.931
Tter_2336
PFAM: alpha-L-rhamnosidase; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
  
  
 
0.929
Tter_2344
Xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: hypothetical protein.
  
  
 0.922
Tter_1939
Beta-galactosidase; KEGG: mxa:MXAN_6555 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.904
Tter_2038
Putative L-arabinose isomerase protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.902
Tter_0181
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family.
     
 0.900
Tter_2037
KEGG: hypothetical protein.
 
     0.847
Tter_2040
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20969 putative sugar uptake ABC transporter permease protein.
       0.773
Tter_2041
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
       0.773
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.731
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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