STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2042PFAM: extracellular solute-binding protein family 1; KEGG: sit:TM1040_3216 extracellular solute-binding protein. (483 aa)    
Predicted Functional Partners:
Tter_2040
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20969 putative sugar uptake ABC transporter permease protein.
 
   0.828
Tter_2041
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
 
   0.828
Tter_2025
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU28750 sugar-binding protein.
  
     0.762
Tter_2744
KEGG: hypothetical protein.
  
     0.757
Tter_2749
PFAM: extracellular solute-binding protein family 5; KEGG: dsh:Dshi_3011 extracellular solute-binding protein.
  
     0.714
Tter_1926
PFAM: aminoglycoside phosphotransferase; KEGG: mpo:Mpop_1539 aminoglycoside phosphotransferase.
  
     0.711
Tter_2644
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1924 sugar transport system (sugar- binding protein).
  
     0.684
Tter_2513
PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar- binding protein.
  
     0.659
Tter_2703
PFAM: extracellular solute-binding protein family 1; KEGG: pmu:PM1762 hypothetical protein.
  
     0.654
Tter_2530
PFAM: glycoside hydrolase family 39; KEGG: cak:Caul_3132 xylan 1,4-beta-xylosidase.
  
     0.633
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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