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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2052PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter. (291 aa)    
Predicted Functional Partners:
Tter_2053
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02026 multiple sugar transport system permease protein.
   0.962
Tter_2051
PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_PA0000143 putative sugar ABC transporter, ATP-binding protein.
 
   0.957
Tter_2041
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
  
  
 
0.907
Tter_2490
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2013 binding-protein-dependent transport systems inner membrane component.
 
   0.835
Tter_2500
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1096 binding-protein-dependent transport systems inner membrane component.
 
   0.833
Tter_2497
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2246 permease protein of sugar ABC transporter.
 
   0.829
Tter_2001
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4664 binding-protein-dependent transport systems inner membrane component.
 
   0.825
Tter_0399
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce5039 trehalose/maltose transport system, permease protein.
 
   0.817
Tter_2701
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bba:Bd1226 maltose/maltodextrin ABC transporter permease.
 
   0.812
Tter_1961
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL90190 putative permease component of ABC transporter.
 
   0.799
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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