STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2072KEGG: scl:sce4298 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (348 aa)    
Predicted Functional Partners:
Tter_2075
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4300 peptide ABC transporter, permease protein.
  
 0.987
Tter_0701
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4436 binding-protein-dependent transport systems inner membrane component.
  
 0.983
Tter_0420
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rce:RC1_3365 oligopeptide transport system permease protein OppC.
  
 0.982
Tter_1803
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4487 binding-protein-dependent transport systems inner membrane component.
  
 0.960
Tter_2747
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4300 peptide ABC transporter, permease protein.
  
 0.899
Tter_0897
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component.
  
 0.877
Tter_0904
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_2853 amino acid ABC transporter permease.
 
    
 0.877
Tter_2074
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4301 peptide ABC transporter, permease protein.
  
 0.839
Tter_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_0451 binding-protein-dependent transport systems inner membrane component.
  
 0.834
Tter_0419
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU11440 oligopeptide ABC transporter (permease).
  
 0.820
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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