Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tter_2119PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_7577 glucose 1-dehydrogenase. (257 aa)    
Predicted Functional Partners:
Tter_2117
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: jan:Jann_0866 cyclic nucleotide-regulated FAD- dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.762
Tter_2118
KEGG: sus:Acid_0204 glycogen debranching enzyme- like protein.
       0.762
Tter_2120
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: scl:sce1356 two component system transcriptional regulatory protein.
       0.590
Tter_2121
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_2725 PAS/PAC sensor signal transduction histidine kinase.
       0.590
Tter_2122
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: aba:Acid345_2151 pyruvate oxidase; Belongs to the TPP enzyme family.
  
 0.477
Tter_2124
PFAM: peptidase M24; KEGG: bha:BH3179 prolidase (proline dipeptidase).
   
   0.432
Tter_2125
PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: noc:Noc_0464 hypothetical protein.
   
 
 0.428
Tter_2116
PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: bcb:BCB4264_A2562 dTDP-glucose 4,6- dehydratase.
   
   0.427
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
      
 0.400
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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