STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2125PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: noc:Noc_0464 hypothetical protein. (1015 aa)    
Predicted Functional Partners:
Tter_2256
PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gsu:GSU1620 iron-sulfur cluster binding protein, putative.
 
 
0.928
Tter_2122
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: aba:Acid345_2151 pyruvate oxidase; Belongs to the TPP enzyme family.
 
 
 
 0.793
Tter_2255
PFAM: protein of unknown function DUF162; KEGG: gsu:GSU1621 hypothetical protein.
  
 
 0.784
Tter_0655
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit.
  
 
 0.780
Tter_0654
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: sat:SYN_02637 electron transfer flavoprotein alpha-subunit.
  
 
 0.772
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.761
Tter_2124
PFAM: peptidase M24; KEGG: bha:BH3179 prolidase (proline dipeptidase).
     
 0.694
Tter_2123
KEGG: sfu:Sfum_3568 hypothetical protein.
       0.671
Tter_0471
PFAM: FAD dependent oxidoreductase; KEGG: mxa:MXAN_7329 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.606
Tter_0784
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: sfu:Sfum_2103 succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.592
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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