STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2130PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: sus:Acid_3789 ATPase, BadF/BadG/BcrA/BcrD type. (328 aa)    
Predicted Functional Partners:
Tter_2132
PFAM: glycoside hydrolase family 4; KEGG: bcz:BCZK4901 6-phospho-beta-glucosidase.
     0.936
Tter_2131
PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bsu:BSU35020 N-acetylglucosamine-6-phosphate isomerase.
  
  
 0.797
Tter_1513
PFAM: conserved hypothetical protein; KEGG: bha:BH0674 hypothetical protein.
 
    0.681
Tter_2133
PFAM: homocysteine S-methyltransferase; KEGG: hypothetical protein.
       0.642
Tter_2134
PFAM: oxidoreductase domain protein; KEGG: bha:BH0708 hypothetical protein.
  
    0.630
Tter_2135
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04137 putative transport system permease ABC transporter protein.
       0.583
Tter_2136
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU06980 hypothetical protein.
       0.583
Tter_2137
PFAM: extracellular solute-binding protein family 1; KEGG: ABC transporter substrate binding protein (sugar).
  
    0.551
Tter_2139
PFAM: ROK family protein; KEGG: gox:GOX1182 putative glucokinase.
     
 0.447
Tter_2129
Hypothetical protein.
       0.435
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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