STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2140PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; protein of unknown function DUF861 cupin_3; KEGG: xfn:XfasM23_0832 cupin 2 domain-containing protein. (288 aa)    
Predicted Functional Partners:
Tter_1842
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase.
  
  
 0.799
Tter_2139
PFAM: ROK family protein; KEGG: gox:GOX1182 putative glucokinase.
     
 0.790
Tter_2138
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbt:BBta_3988 putative dehydrogenase/oxidoreductase.
       0.777
Tter_2141
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rle:RL2790 GFO/IDH/MocA family oxidoreductase.
       0.777
Tter_2142
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bce:BC4053 GntR family transcriptional regulator.
       0.701
Tter_2813
PFAM: biotin/lipoyl attachment domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_1700 serine acetyltransferase-like protein.
  
  
 0.658
Tter_2137
PFAM: extracellular solute-binding protein family 1; KEGG: ABC transporter substrate binding protein (sugar).
       0.596
Tter_2135
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04137 putative transport system permease ABC transporter protein.
       0.556
Tter_2136
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU06980 hypothetical protein.
       0.556
Tter_2134
PFAM: oxidoreductase domain protein; KEGG: bha:BH0708 hypothetical protein.
       0.525
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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