STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2141PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rle:RL2790 GFO/IDH/MocA family oxidoreductase. (369 aa)    
Predicted Functional Partners:
Tter_2138
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bbt:BBta_3988 putative dehydrogenase/oxidoreductase.
 
    
0.818
Tter_2140
PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; protein of unknown function DUF861 cupin_3; KEGG: xfn:XfasM23_0832 cupin 2 domain-containing protein.
       0.777
Tter_2139
PFAM: ROK family protein; KEGG: gox:GOX1182 putative glucokinase.
       0.773
Tter_2606
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mlo:mll1511 hypothetical protein.
  
     0.755
Tter_2247
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SM_b21355 putative oxidoreductase protein.
  
     0.753
Tter_2602
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bid:Bind_0626 oxidoreductase domain- containing protein.
  
     0.752
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
  
     0.737
Tter_2142
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bce:BC4053 GntR family transcriptional regulator.
  
    0.712
Tter_2134
PFAM: oxidoreductase domain protein; KEGG: bha:BH0708 hypothetical protein.
 
    
0.610
Tter_2137
PFAM: extracellular solute-binding protein family 1; KEGG: ABC transporter substrate binding protein (sugar).
       0.596
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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