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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_21504Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (83 aa)    
Predicted Functional Partners:
Tter_1540
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sme:SMc02524 formate dehydrogenase subunit gamma.
   
 
 0.825
Tter_0473
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sus:Acid_3815 glutamate synthase (NADH) small subunit.
   
 
 0.809
Tter_2151
PFAM: protein of unknown function DUF59; KEGG: noc:Noc_1484 hypothetical protein.
       0.774
Tter_2152
PFAM: Domain of unknown function DUF1858; KEGG: sme:SMa1256 hypothetical protein.
       0.773
Tter_2153
KEGG: smd:Smed_6282 hypothetical protein.
       0.773
Tter_2154
KEGG: mag:amb3531 hypothetical protein.
       0.773
Tter_2155
KEGG: rpd:RPD_4272 copper resistance D.
       0.757
Tter_0334
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: glo:Glov_1076 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.746
Tter_2156
PFAM: Cupin 2 conserved barrel domain protein; KEGG: mxa:MXAN_5221 hypothetical protein.
     
 0.688
Tter_0860
Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: ank:AnaeK_0872 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.578
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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