STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_2169KEGG: bpd:BURPS668_3032 putative lipoprotein. (383 aa)    
Predicted Functional Partners:
Tter_2321
PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_2314 drug resistance transporter, EmrB/QacA subfamily.
  
     0.667
Tter_1084
PFAM: Chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: sus:Acid_7899 CBS domain-containing protein.
  
     0.639
Tter_2127
PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: par:Psyc_2081 hypothetical protein.
  
     0.557
Tter_2170
PFAM: nitroreductase; KEGG: pen:PSEEN3911 nitroreductase.
       0.547
Tter_2847
PFAM: phosphoesterase; KEGG: bid:Bind_1165 phosphoesterase.
  
     0.527
Tter_2682
KEGG: aba:Acid345_0701 hypothetical protein.
  
     0.514
Tter_2168
Magnesium transporter; Acts as a magnesium transporter.
       0.423
Tter_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_0451 binding-protein-dependent transport systems inner membrane component.
       0.402
Tter_2172
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00702 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
       0.402
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.