Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_2170PFAM: nitroreductase; KEGG: pen:PSEEN3911 nitroreductase. (204 aa)    
Predicted Functional Partners:
Tter_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_0451 binding-protein-dependent transport systems inner membrane component.
       0.550
Tter_2172
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00702 ABC-type dipeptide/oligopeptide/nickel transport system, permease components.
       0.550
Tter_2169
KEGG: bpd:BURPS668_3032 putative lipoprotein.
       0.547
menE
O-succinylbenzoate-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
   
 
 0.498
Tter_0474
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
     
 0.450
Tter_0855
PFAM: Abortive infection protein; KEGG: cps:CPS_2226 CAAX amino terminal protease family protein.
  
  
 0.445
Tter_1576
PFAM: Abortive infection protein; KEGG: bcy:Bcer98_0164 abortive infection protein.
  
  
 0.445
Tter_1123
PFAM: ABC-2 type transporter; KEGG: ank:AnaeK_4023 ABC-2 type transporter.
  
    0.443
Tter_1438
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
  
    0.443
Tter_1853
PFAM: ABC-2 type transporter; KEGG: pmr:PMI0616 ABC transporter, permease protein.
  
    0.443
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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